Biomolecular mechanism discovery driven by computational biology: Functions of uncharacterized genes

Biomolecular mechanism discovery driven by computational biology: Functions of uncharacterized genes

May 26, 2012

Frank EisenhaberDirector – Bioinformatics Institute (BII) Agency for Science, Technology and Research (A*STAR) 30 Biopolis Street #07-01, Matrix Building, 138671, Singapore. ABSTRACT Although life sciences are not truly an area of theoretical research, there are important niches where non-experimental efforts can make…

Structural and biochemical studies of Serine Acetyltransferase reveal why the parasite Entamoeba histolytica cannot form Cysteine Synthase complex

Structural and biochemical studies of Serine Acetyltransferase reveal why the parasite Entamoeba histolytica cannot form Cysteine Synthase complex

May 26, 2012

Sudhir Kumar1, Isha Raj1, Isha Nagpal1, N Subbarao2, S Gourinath11School of Life Sciences, Jawaharlal Nehru University, New Delhi-110067, India.2School of computational and integrative sciences, Jawaharlal Nehru University, New Delhi-110067, India. ABSTRACT Cysteine (cys) plays a major role in growth and survival of…

Global Optimization by Conformational Space Annealing And its Applications to Various Biological Systems

Global Optimization by Conformational Space Annealing And its Applications to Various Biological Systems

May 26, 2012

Jooyoung LeeCenter for In Silico Protein Science & School of Computational Sciences, Korea Institute for Advanced Study, 85 Hoegiro, Dongdaemun-gu, Seoul 130-722, Korea ABSTRACT One of the fundamental goals of modern sciences is to understand the nature of life, and deciphering the…

Candidate gene prioritization and validation using an integrated network-based approach

Candidate gene prioritization and validation using an integrated network-based approach

May 26, 2012

Kenji MizuguchiNational Institute of Biomedical Innovation, 7-6-8 Asagi-Saito, Ibaraki-City, Osaka, 567-0085, Japan ABSTRACT We have recently developed TargetMine, an integrated data warehouse for assisting drug discovery (http://targetmine.nibio.go.jp) and proposed an interactive method for target prioritization [1]. Target Mine and other computational biology…

Deciphering cardiac gene regulatory networks

Deciphering cardiac gene regulatory networks

May 26, 2012

Mirana Ramialison, Romaric Bouveret, Tram Doan, Danielle de Jong, Nicole Schonrock, Richard P HarveyThe Victor Chang Cardiac Research Institute, Sydney, Australia ABSTRACT The heart is a complex organ which successful develop­ment relies in part on complex feedback loops and cross-regulation between cardiac…

Molecular simulation to biochemical network perturbation in infectious disease

Molecular simulation to biochemical network perturbation in infectious disease

May 26, 2012

Shailza SinghNational Centre for Cell Science, NCCS Complex, Pune University Campus, Pune 411007, India. ABSTRACT Computational systems biology aims to develop a class of integrated mathematical, computational and experimental techniques with the goal of linking the knowledge of different molecular parts of…

Plasticity of hydrophobic grooves in anti-apoptotic Bcl-2 proteins

Plasticity of hydrophobic grooves in anti-apoptotic Bcl-2 proteins

May 26, 2012

R SankararamakrishnanDepartment of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, U. P., India. ABSTRACT Apoptosis is an important physiological process in which unnecessary and malfunctioning of the cells are removed in a controlled and regulated fashion in multicellular organisms. The…

The emerging assembly line of genomes to hit molecules In silico

The emerging assembly line of genomes to hit molecules In silico

May 26, 2012

B JayaramDepartment of Chemistry & Kusuma School of Biological Sciences & Supercomputing Facility for Bioinformatics & Computational Biology, Indian Institute of Technology, Delhi, Hauz Khas, New Delhi-110016, India. ABSTRACT Recent advances in genome sequencing projects and the concurrent developments in scientific softwares…

Predicting bio-molecular interactions in proteins and nucleic acids

Predicting bio-molecular interactions in proteins and nucleic acids

May 26, 2012

Shandar AhmadNational Institute of Biomedical Innovation, 7-6-8 Asagi-Saito, Ibaraki-City, Osaka, 567-0085, Japan. ABSTRACT All biological functions can ultimately be described in terms of interactions between proteins, nucleic acids and other smaller molecules. Molecular interactions provide for the enormous complexity of events in…